No. words: 1030; after pruning: 1004


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:381)  369  0.26 0.26 0.00  MoSU003F_D02_BE443572Ld06P005D01D071F1_014.ab1        1   382 (128)  C MoSU003R_D02_BE443572Ld06P005D01D071R1_014.ab1   (137)   383     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C MoSU003R_D02_BE443572Ld06P005D01D071R1_014.ab1   520 
  195    MoSU003F_D02_BE443572Ld06P005D01D071F1_014.ab1    57 
  223  C MoSU003R_D02_BE443572Ld06P005D01D071R1_014.ab1   298 
  231    MoSU003F_D02_BE443572Ld06P005D01D071F1_014.ab1    93 
  235  C MoSU003R_D02_BE443572Ld06P005D01D071R1_014.ab1   286 
  255    MoSU003F_D02_BE443572Ld06P005D01D071F1_014.ab1   117 
  259  C MoSU003R_D02_BE443572Ld06P005D01D071R1_014.ab1   262 
  263    MoSU003F_D02_BE443572Ld06P005D01D071F1_014.ab1   125 
  267  C MoSU003R_D02_BE443572Ld06P005D01D071R1_014.ab1   254 
  339    MoSU003F_D02_BE443572Ld06P005D01D071F1_014.ab1   201 
  347  C MoSU003R_D02_BE443572Ld06P005D01D071R1_014.ab1   174 
  355    MoSU003F_D02_BE443572Ld06P005D01D071F1_014.ab1   217 
  367  C MoSU003R_D02_BE443572Ld06P005D01D071R1_014.ab1   154 
  371    MoSU003F_D02_BE443572Ld06P005D01D071F1_014.ab1   233 
  383  C MoSU003R_D02_BE443572Ld06P005D01D071R1_014.ab1   138 
  387    MoSU003F_D02_BE443572Ld06P005D01D071F1_014.ab1   249 
  419  C MoSU003R_D02_BE443572Ld06P005D01D071R1_014.ab1   102 
  427    MoSU003F_D02_BE443572Ld06P005D01D071F1_014.ab1   289 
  435  C MoSU003R_D02_BE443572Ld06P005D01D071R1_014.ab1    86 
  455    MoSU003F_D02_BE443572Ld06P005D01D071F1_014.ab1   317 
Contig length: old 648, new 648

Contig length: old 648, new 648
New start: 0