No. words: 1022; after pruning: 996


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:381)  364  0.26 0.52 0.00  MoSU003F_E02_BE443572Ld07P005D01D071F1_007.ab1        1   381 (128)  C MoSU003R_E02_BE443572Ld07P005D01D071R1_007.ab1   (130)   383     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C MoSU003R_E02_BE443572Ld07P005D01D071R1_007.ab1   513 
  173    MoSU003F_E02_BE443572Ld07P005D01D071F1_007.ab1    41 
  177  C MoSU003R_E02_BE443572Ld07P005D01D071R1_007.ab1   337 
  189    MoSU003F_E02_BE443572Ld07P005D01D071F1_007.ab1    57 
  201  C MoSU003R_E02_BE443572Ld07P005D01D071R1_007.ab1   313 
  237    MoSU003F_E02_BE443572Ld07P005D01D071F1_007.ab1   105 
  241  C MoSU003R_E02_BE443572Ld07P005D01D071R1_007.ab1   273 
  257    MoSU003F_E02_BE443572Ld07P005D01D071F1_007.ab1   125 
  265  C MoSU003R_E02_BE443572Ld07P005D01D071R1_007.ab1   249 
  281    MoSU003F_E02_BE443572Ld07P005D01D071F1_007.ab1   149 
  289  C MoSU003R_E02_BE443572Ld07P005D01D071R1_007.ab1   225 
  333    MoSU003F_E02_BE443572Ld07P005D01D071F1_007.ab1   201 
  337  C MoSU003R_E02_BE443572Ld07P005D01D071R1_007.ab1   177 
  349    MoSU003F_E02_BE443572Ld07P005D01D071F1_007.ab1   217 
  389  C MoSU003R_E02_BE443572Ld07P005D01D071R1_007.ab1   125 
  393    MoSU003F_E02_BE443572Ld07P005D01D071F1_007.ab1   261 
  413  C MoSU003R_E02_BE443572Ld07P005D01D071R1_007.ab1   101 
  421    MoSU003F_E02_BE443572Ld07P005D01D071F1_007.ab1   289 
  429  C MoSU003R_E02_BE443572Ld07P005D01D071R1_007.ab1    85 
  453    MoSU003F_E02_BE443572Ld07P005D01D071F1_007.ab1   321 
Contig length: old 640, new 641

Contig length: old 641, new 641
New start: 0