No. words: 1029; after pruning: 1003


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.7 (1,1:382)  357  1.31 0.00 0.26  MoSU003F_F02_BE443572Ld08P005D01D071F1_015.ab1        1   383 (128)  C MoSU003R_F02_BE443572Ld08P005D01D071R1_015.ab1   (136)   382     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C MoSU003R_F02_BE443572Ld08P005D01D071R1_015.ab1   518 
  205    MoSU003F_F02_BE443572Ld08P005D01D071F1_015.ab1    69 
  225  C MoSU003R_F02_BE443572Ld08P005D01D071R1_015.ab1   294 
  253    MoSU003F_F02_BE443572Ld08P005D01D071F1_015.ab1   117 
  265  C MoSU003R_F02_BE443572Ld08P005D01D071R1_015.ab1   254 
  281    MoSU003F_F02_BE443572Ld08P005D01D071F1_015.ab1   145 
  289  C MoSU003R_F02_BE443572Ld08P005D01D071R1_015.ab1   230 
  309    MoSU003F_F02_BE443572Ld08P005D01D071F1_015.ab1   173 
  317  C MoSU003R_F02_BE443572Ld08P005D01D071R1_015.ab1   202 
  337    MoSU003F_F02_BE443572Ld08P005D01D071F1_015.ab1   201 
  349  C MoSU003R_F02_BE443572Ld08P005D01D071R1_015.ab1   170 
  357    MoSU003F_F02_BE443572Ld08P005D01D071F1_015.ab1   221 
  377  C MoSU003R_F02_BE443572Ld08P005D01D071R1_015.ab1   142 
  385    MoSU003F_F02_BE443572Ld08P005D01D071F1_015.ab1   249 
  397  C MoSU003R_F02_BE443572Ld08P005D01D071R1_015.ab1   122 
  405    MoSU003F_F02_BE443572Ld08P005D01D071F1_015.ab1   269 
Contig length: old 646, new 647

Contig length: old 647, new 647
New start: 0