No. words: 1021; after pruning: 995


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:374)  364  0.00 0.27 0.00  MoSU003F_G02_BE443572Ld09P005D01D071F1_008.ab1        1   375 (135)  C MoSU003R_G02_BE443572Ld09P005D01D071R1_008.ab1   (135)   376     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C MoSU003R_G02_BE443572Ld09P005D01D071R1_008.ab1   511 
  189    MoSU003F_G02_BE443572Ld09P005D01D071F1_008.ab1    53 
  225  C MoSU003R_G02_BE443572Ld09P005D01D071R1_008.ab1   287 
  253    MoSU003F_G02_BE443572Ld09P005D01D071F1_008.ab1   117 
  269  C MoSU003R_G02_BE443572Ld09P005D01D071R1_008.ab1   243 
  301    MoSU003F_G02_BE443572Ld09P005D01D071F1_008.ab1   165 
  345  C MoSU003R_G02_BE443572Ld09P005D01D071R1_008.ab1   167 
  353    MoSU003F_G02_BE443572Ld09P005D01D071F1_008.ab1   217 
  393  C MoSU003R_G02_BE443572Ld09P005D01D071R1_008.ab1   119 
  405    MoSU003F_G02_BE443572Ld09P005D01D071F1_008.ab1   269 
Contig length: old 646, new 646

Contig length: old 646, new 646
New start: 0