No. words: 1025; after pruning: 999


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:375)  365  0.27 0.00 0.00  MoSU006F_G04_BE443572Ld09P015B04B101F1_024.ab1        1   376 (137)  C MoSU006R_G04_BE443572Ld09P015B04B101R1_024.ab1   (136)   376     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C MoSU006R_G04_BE443572Ld09P015B04B101R1_024.ab1   512 
  254    MoSU006F_G04_BE443572Ld09P015B04B101F1_024.ab1   118 
  262  C MoSU006R_G04_BE443572Ld09P015B04B101R1_024.ab1   251 
  350    MoSU006F_G04_BE443572Ld09P015B04B101F1_024.ab1   214 
  362  C MoSU006R_G04_BE443572Ld09P015B04B101R1_024.ab1   151 
  398    MoSU006F_G04_BE443572Ld09P015B04B101F1_024.ab1   262 
  418  C MoSU006R_G04_BE443572Ld09P015B04B101R1_024.ab1    95 
  422    MoSU006F_G04_BE443572Ld09P015B04B101F1_024.ab1   286 
  438  C MoSU006R_G04_BE443572Ld09P015B04B101R1_024.ab1    75 
  450    MoSU006F_G04_BE443572Ld09P015B04B101F1_024.ab1   314 
Contig length: old 649, new 649

Contig length: old 649, new 649
New start: 0