No. words: 1029; after pruning: 1003


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:375)  364  0.00 0.00 0.27  MoSU006F_H04_BE443572Ld10P015B04B101F1_032.ab1        1   376 (128)  C MoSU006R_H04_BE443572Ld10P015B04B101R1_032.ab1   (150)   375     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C MoSU006R_H04_BE443572Ld10P015B04B101R1_032.ab1   525 
  218    MoSU006F_H04_BE443572Ld10P015B04B101F1_032.ab1    68 
  226  C MoSU006R_H04_BE443572Ld10P015B04B101R1_032.ab1   300 
  238    MoSU006F_H04_BE443572Ld10P015B04B101F1_032.ab1    88 
  242  C MoSU006R_H04_BE443572Ld10P015B04B101R1_032.ab1   284 
  246    MoSU006F_H04_BE443572Ld10P015B04B101F1_032.ab1    96 
  250  C MoSU006R_H04_BE443572Ld10P015B04B101R1_032.ab1   276 
  258    MoSU006F_H04_BE443572Ld10P015B04B101F1_032.ab1   108 
  270  C MoSU006R_H04_BE443572Ld10P015B04B101R1_032.ab1   256 
  274    MoSU006F_H04_BE443572Ld10P015B04B101F1_032.ab1   124 
  278  C MoSU006R_H04_BE443572Ld10P015B04B101R1_032.ab1   248 
  310    MoSU006F_H04_BE443572Ld10P015B04B101F1_032.ab1   160 
  318  C MoSU006R_H04_BE443572Ld10P015B04B101R1_032.ab1   208 
  346    MoSU006F_H04_BE443572Ld10P015B04B101F1_032.ab1   196 
  374  C MoSU006R_H04_BE443572Ld10P015B04B101R1_032.ab1   152 
  386    MoSU006F_H04_BE443572Ld10P015B04B101F1_032.ab1   236 
  394  C MoSU006R_H04_BE443572Ld10P015B04B101R1_032.ab1   132 
  402    MoSU006F_H04_BE443572Ld10P015B04B101F1_032.ab1   252 
  406  C MoSU006R_H04_BE443572Ld10P015B04B101R1_032.ab1   120 
  414    MoSU006F_H04_BE443572Ld10P015B04B101F1_032.ab1   264 
  418  C MoSU006R_H04_BE443572Ld10P015B04B101R1_032.ab1   108 
  422    MoSU006F_H04_BE443572Ld10P015B04B101F1_032.ab1   272 
  438  C MoSU006R_H04_BE443572Ld10P015B04B101R1_032.ab1    88 
  446    MoSU006F_H04_BE443572Ld10P015B04B101F1_032.ab1   296 
  454  C MoSU006R_H04_BE443572Ld10P015B04B101R1_032.ab1    72 
  462    MoSU006F_H04_BE443572Ld10P015B04B101F1_032.ab1   312 
Contig length: old 653, new 654

Contig length: old 654, new 654
New start: 0