No. words: 453; after pruning: 427


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.6 (1,1:167)  159  0.00 0.00 0.60  MoSU029F_A06_BE443572Sn27P005D01P023B061F1_048.ab1        1   168 (55)  C MoSU029R_A06_BE443572Sn27P005D01P023B061R1_048.ab1   (63)   167     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  82 nodes

 43 str. conn. components

Path
    1  C MoSU029R_A06_BE443572Sn27P005D01P023B061R1_048.ab1   230 
  115    MoSU029F_A06_BE443572Sn27P005D01P023B061F1_048.ab1    52 
  119  C MoSU029R_A06_BE443572Sn27P005D01P023B061R1_048.ab1   112 
  135    MoSU029F_A06_BE443572Sn27P005D01P023B061F1_048.ab1    72 
  147  C MoSU029R_A06_BE443572Sn27P005D01P023B061R1_048.ab1    84 
  151    MoSU029F_A06_BE443572Sn27P005D01P023B061F1_048.ab1    88 
Contig length: old 285, new 286

Contig length: old 286, new 286
New start: 0