No. words: 471; after pruning: 445


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 3.6 (1,1:183)  173  0.00 0.00 0.55  MoSU029F_C05_BE443572Ta21P005D01P023B061F1_043.ab1        2   184 (57)  C MoSU029R_C05_BE443572Ta21P005D01P023B061R1_043.ab1   (48)   182     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  90 nodes

 47 str. conn. components

Path
    1  C MoSU029R_C05_BE443572Ta21P005D01P023B061R1_043.ab1   230 
  108    MoSU029F_C05_BE443572Ta21P005D01P023B061F1_043.ab1    61 
  120  C MoSU029R_C05_BE443572Ta21P005D01P023B061R1_043.ab1   111 
  136    MoSU029F_C05_BE443572Ta21P005D01P023B061F1_043.ab1    89 
  144  C MoSU029R_C05_BE443572Ta21P005D01P023B061R1_043.ab1    87 
  160    MoSU029F_C05_BE443572Ta21P005D01P023B061F1_043.ab1   113 
Contig length: old 287, new 288

Contig length: old 288, new 288
New start: 0