No. words: 460; after pruning: 434


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.5 (1,1:174)  157  0.57 0.00 1.14  MoSU029F_E05_BE443572Ta23P005D01P023B061F1_039.ab1        1   175 (55)  C MoSU029R_E05_BE443572Ta23P005D01P023B061R1_039.ab1   (57)   173     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  80 nodes

 42 str. conn. components

Path
    1  C MoSU029R_E05_BE443572Ta23P005D01P023B061R1_039.ab1   230 
  155    MoSU029F_E05_BE443572Ta23P005D01P023B061F1_039.ab1    99 
  163  C MoSU029R_E05_BE443572Ta23P005D01P023B061R1_039.ab1    68 
  179    MoSU029F_E05_BE443572Ta23P005D01P023B061F1_039.ab1   123 
  196  C MoSU029R_E05_BE443572Ta23P005D01P023B061R1_039.ab1    35 
  208    MoSU029F_E05_BE443572Ta23P005D01P023B061F1_039.ab1   152 
Contig length: old 285, new 286

Contig length: old 286, new 286
New start: 0