No. words: 1393; after pruning: 1367


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 13.0 (1,1:660)  639  0.00 0.00 0.15  MoSU023F_F05_BE443596At02P019D02P019D081F1_037.ab1        4   661 (32)  C MoSU023R_F05_BE443596At02P019D02P019D081R1_037.ab1   (43)   657     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  328 nodes

 166 str. conn. components

Path
    1  C MoSU023R_F05_BE443596At02P019D02P019D081R1_037.ab1   700 
  107    MoSU023F_F05_BE443596At02P019D02P019D081F1_037.ab1    67 
  223  C MoSU023R_F05_BE443596At02P019D02P019D081R1_037.ab1   478 
  275    MoSU023F_F05_BE443596At02P019D02P019D081F1_037.ab1   235 
  351  C MoSU023R_F05_BE443596At02P019D02P019D081R1_037.ab1   350 
  399    MoSU023F_F05_BE443596At02P019D02P019D081F1_037.ab1   359 
  483  C MoSU023R_F05_BE443596At02P019D02P019D081R1_037.ab1   218 
  555    MoSU023F_F05_BE443596At02P019D02P019D081F1_037.ab1   515 
  559  C MoSU023R_F05_BE443596At02P019D02P019D081R1_037.ab1   142 
  575    MoSU023F_F05_BE443596At02P019D02P019D081F1_037.ab1   535 
  579  C MoSU023R_F05_BE443596At02P019D02P019D081R1_037.ab1   122 
  583    MoSU023F_F05_BE443596At02P019D02P019D081F1_037.ab1   543 
  599  C MoSU023R_F05_BE443596At02P019D02P019D081R1_037.ab1   102 
  619    MoSU023F_F05_BE443596At02P019D02P019D081F1_037.ab1   579 
  623  C MoSU023R_F05_BE443596At02P019D02P019D081R1_037.ab1    78 
  667    MoSU023F_F05_BE443596At02P019D02P019D081F1_037.ab1   627 
  671  C MoSU023R_F05_BE443596At02P019D02P019D081R1_037.ab1    30 
  687    MoSU023F_F05_BE443596At02P019D02P019D081F1_037.ab1   647 
Contig length: old 732, new 733

Contig length: old 733, new 733
New start: 0