No. words: 1619; after pruning: 1593


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.5 (1,1:650)  635  0.00 0.00 0.00  MoSU023F_G05_BE443596Ld01P019D02P019D081F1_035.ab1        3   651 (152)  C MoSU023R_G05_BE443596Ld01P019D02P019D081R1_035.ab1   (167)   649     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1  C MoSU023R_G05_BE443596Ld01P019D02P019D081R1_035.ab1   816 
  199    MoSU023F_G05_BE443596Ld01P019D02P019D081F1_035.ab1    34 
  207  C MoSU023R_G05_BE443596Ld01P019D02P019D081R1_035.ab1   610 
  323    MoSU023F_G05_BE443596Ld01P019D02P019D081F1_035.ab1   158 
  331  C MoSU023R_G05_BE443596Ld01P019D02P019D081R1_035.ab1   486 
  395    MoSU023F_G05_BE443596Ld01P019D02P019D081F1_035.ab1   230 
  411  C MoSU023R_G05_BE443596Ld01P019D02P019D081R1_035.ab1   406 
  535    MoSU023F_G05_BE443596Ld01P019D02P019D081F1_035.ab1   370 
  571  C MoSU023R_G05_BE443596Ld01P019D02P019D081R1_035.ab1   246 
  579    MoSU023F_G05_BE443596Ld01P019D02P019D081F1_035.ab1   414 
  627  C MoSU023R_G05_BE443596Ld01P019D02P019D081R1_035.ab1   190 
  639    MoSU023F_G05_BE443596Ld01P019D02P019D081F1_035.ab1   474 
  667  C MoSU023R_G05_BE443596Ld01P019D02P019D081R1_035.ab1   150 
  671    MoSU023F_G05_BE443596Ld01P019D02P019D081F1_035.ab1   506 
  723  C MoSU023R_G05_BE443596Ld01P019D02P019D081R1_035.ab1    94 
  727    MoSU023F_G05_BE443596Ld01P019D02P019D081F1_035.ab1   562 
  755  C MoSU023R_G05_BE443596Ld01P019D02P019D081R1_035.ab1    62 
  771    MoSU023F_G05_BE443596Ld01P019D02P019D081F1_035.ab1   606 
  775  C MoSU023R_G05_BE443596Ld01P019D02P019D081R1_035.ab1    42 
  791    MoSU023F_G05_BE443596Ld01P019D02P019D081F1_035.ab1   626 
  795  C MoSU023R_G05_BE443596Ld01P019D02P019D081R1_035.ab1    22 
  803    MoSU023F_G05_BE443596Ld01P019D02P019D081F1_035.ab1   638 
Contig length: old 968, new 968

Contig length: old 968, new 968
New start: 0