No. words: 1622; after pruning: 1582


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:656)  627  0.46 0.15 0.15  MoSU023F_H05_BE443596Ld02P019D02P019D081F1_033.ab1        1   657 (153)  C MoSU023R_H05_BE443596Ld02P019D02P019D081R1_033.ab1   (155)   657     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C MoSU023R_H05_BE443596Ld02P019D02P019D081R1_033.ab1   812 
  212    MoSU023F_H05_BE443596Ld02P019D02P019D081F1_033.ab1    56 
  216  C MoSU023R_H05_BE443596Ld02P019D02P019D081R1_033.ab1   597 
  320    MoSU023F_H05_BE443596Ld02P019D02P019D081F1_033.ab1   164 
  328  C MoSU023R_H05_BE443596Ld02P019D02P019D081R1_033.ab1   485 
  448    MoSU023F_H05_BE443596Ld02P019D02P019D081F1_033.ab1   292 
  468  C MoSU023R_H05_BE443596Ld02P019D02P019D081R1_033.ab1   345 
  528    MoSU023F_H05_BE443596Ld02P019D02P019D081F1_033.ab1   372 
  544  C MoSU023R_H05_BE443596Ld02P019D02P019D081R1_033.ab1   269 
  612    MoSU023F_H05_BE443596Ld02P019D02P019D081F1_033.ab1   456 
  620  C MoSU023R_H05_BE443596Ld02P019D02P019D081R1_033.ab1   193 
  672    MoSU023F_H05_BE443596Ld02P019D02P019D081F1_033.ab1   516 
  680  C MoSU023R_H05_BE443596Ld02P019D02P019D081R1_033.ab1   133 
  692    MoSU023F_H05_BE443596Ld02P019D02P019D081F1_033.ab1   536 
  696  C MoSU023R_H05_BE443596Ld02P019D02P019D081R1_033.ab1   117 
  704    MoSU023F_H05_BE443596Ld02P019D02P019D081F1_033.ab1   548 
  716  C MoSU023R_H05_BE443596Ld02P019D02P019D081R1_033.ab1    97 
  725    MoSU023F_H05_BE443596Ld02P019D02P019D081F1_033.ab1   569 
  753  C MoSU023R_H05_BE443596Ld02P019D02P019D081R1_033.ab1    60 
  757    MoSU023F_H05_BE443596Ld02P019D02P019D081F1_033.ab1   601 
Contig length: old 965, new 966

Contig length: old 966, new 966
New start: 0