No. words: 1413; after pruning: 1387


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 12.1 (1,1:650)  592  0.81 0.00 0.00  MoSU023F_H06_BE443596Ld10P019D02P019D081F1_034.ab1       31   650 (142)  C MoSU023R_H06_BE443596Ld10P019D02P019D081R1_034.ab1   (0)   621     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1    MoSU023F_H06_BE443596Ld10P019D02P019D081F1_034.ab1     1 
  323  C MoSU023R_H06_BE443596Ld10P019D02P019D081R1_034.ab1   329 
  327    MoSU023F_H06_BE443596Ld10P019D02P019D081F1_034.ab1   327 
  387  C MoSU023R_H06_BE443596Ld10P019D02P019D081R1_034.ab1   265 
  391    MoSU023F_H06_BE443596Ld10P019D02P019D081F1_034.ab1   391 
  559  C MoSU023R_H06_BE443596Ld10P019D02P019D081R1_034.ab1    93 
  567    MoSU023F_H06_BE443596Ld10P019D02P019D081F1_034.ab1   567 
  591  C MoSU023R_H06_BE443596Ld10P019D02P019D081R1_034.ab1    61 
  599    MoSU023F_H06_BE443596Ld10P019D02P019D081F1_034.ab1   599 
  635  C MoSU023R_H06_BE443596Ld10P019D02P019D081R1_034.ab1    17 
  643    MoSU023F_H06_BE443596Ld10P019D02P019D081F1_034.ab1   643 
Contig length: old 792, new 792

Contig length: old 792, new 792
New start: 0