No. words: 665; after pruning: 639


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 3.4 (1,1:279)  253  2.52 0.00 0.00  MoSU011F_C11_BE443936Ta11P020D04P005A081F1_091.ab1        3   280 (54)  C MoSU011R_C11_BE443936Ta11P020D04P005A081R1_091.ab1   (53)   278     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  132 nodes

 68 str. conn. components

Path
    1  C MoSU011R_C11_BE443936Ta11P020D04P005A081R1_091.ab1   331 
  226    MoSU011F_C11_BE443936Ta11P020D04P005A081F1_091.ab1   175 
  316  C MoSU011R_C11_BE443936Ta11P020D04P005A081R1_091.ab1    16 
  320    MoSU011F_C11_BE443936Ta11P020D04P005A081F1_091.ab1   269 
Contig length: old 385, new 385

Contig length: old 385, new 385
New start: 0