No. words: 644; after pruning: 618


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 5.1 (1,1:278)  271  0.36 0.00 0.00  MoSU011F_D08_BE443936Ta20P020D04P005A081F1_058.ab1        2   279 (36)  C MoSU011R_D08_BE443936Ta20P020D04P005A081R1_058.ab1   (51)   278     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  138 nodes

 71 str. conn. components

Path
    1  C MoSU011R_D08_BE443936Ta20P020D04P005A081R1_058.ab1   329 
  308    MoSU011F_D08_BE443936Ta20P020D04P005A081F1_058.ab1   258 
  312  C MoSU011R_D08_BE443936Ta20P020D04P005A081R1_058.ab1    18 
  324    MoSU011F_D08_BE443936Ta20P020D04P005A081F1_058.ab1   274 
Contig length: old 365, new 365

Contig length: old 365, new 365
New start: 0