No. words: 701; after pruning: 675


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 4.5 (1,1:293)  277  0.00 0.69 0.00  MoSU020F_E09_BE443936Ta21P020F03P005A081F1_071.ab1        4   293 (66)  C MoSU020R_E09_BE443936Ta21P020F03P005A081R1_071.ab1   (50)   292     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  140 nodes

 72 str. conn. components

Path
    1  C MoSU020R_E09_BE443936Ta21P020F03P005A081R1_071.ab1   342 
   84    MoSU020F_E09_BE443936Ta21P020F03P005A081F1_071.ab1    35 
  124  C MoSU020R_E09_BE443936Ta21P020F03P005A081R1_071.ab1   219 
  240    MoSU020F_E09_BE443936Ta21P020F03P005A081F1_071.ab1   191 
Contig length: old 407, new 408

Contig length: old 408, new 408
New start: 0