No. words: 449; after pruning: 423


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.1 (1,1:168)  159  0.00 0.00 0.59  MoSU011F_H01_BE443936Ta23P020H04P005A081F1_001.ab1        1   169 (50)  C MoSU011R_H01_BE443936Ta23P020H04P005A081R1_001.ab1   (62)   168     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  82 nodes

 43 str. conn. components

Path
    1  C MoSU011R_H01_BE443936Ta23P020H04P005A081R1_001.ab1   230 
  106    MoSU011F_H01_BE443936Ta23P020H04P005A081F1_001.ab1    44 
  110  C MoSU011R_H01_BE443936Ta23P020H04P005A081R1_001.ab1   121 
  118    MoSU011F_H01_BE443936Ta23P020H04P005A081F1_001.ab1    56 
  122  C MoSU011R_H01_BE443936Ta23P020H04P005A081R1_001.ab1   109 
  126    MoSU011F_H01_BE443936Ta23P020H04P005A081F1_001.ab1    64 
  138  C MoSU011R_H01_BE443936Ta23P020H04P005A081R1_001.ab1    93 
  150    MoSU011F_H01_BE443936Ta23P020H04P005A081F1_001.ab1    88 
  154  C MoSU011R_H01_BE443936Ta23P020H04P005A081R1_001.ab1    77 
  170    MoSU011F_H01_BE443936Ta23P020H04P005A081F1_001.ab1   108 
Contig length: old 280, new 281

Contig length: old 281, new 281
New start: 0