No. words: 846; after pruning: 820


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 7.4 (1,1:376)  362  0.27 0.00 0.27  MoSU011F_A07_BE443936Td07P005A02P020A041F1_063.ab1        1   374 (58)  C MoSU011R_A07_BE443936Td07P005A02P020A041R1_063.ab1   (38)   376     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  182 nodes

 93 str. conn. components

Path
    1  C MoSU011R_A07_BE443936Td07P005A02P020A041R1_063.ab1   414 
  218    MoSU011F_A07_BE443936Td07P005A02P020A041F1_063.ab1   180 
  354  C MoSU011R_A07_BE443936Td07P005A02P020A041R1_063.ab1    61 
  358    MoSU011F_A07_BE443936Td07P005A02P020A041F1_063.ab1   320 
Contig length: old 469, new 470

Contig length: old 470, new 470
New start: 0