No. words: 1350; after pruning: 1324


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.8 (1,1:605)  572  0.66 0.00 0.17  MoSU013F_D11_BE444125As02P005A06P005A121F1_089.ab1        1   606 (69)  C MoSU013R_D11_BE444125As02P005A06P005A121R1_089.ab1   (70)   605     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C MoSU013R_D11_BE444125As02P005A06P005A121R1_089.ab1   675 
   78    MoSU013F_D11_BE444125As02P005A06P005A121F1_089.ab1     8 
   82  C MoSU013R_D11_BE444125As02P005A06P005A121R1_089.ab1   594 
  250    MoSU013F_D11_BE444125As02P005A06P005A121F1_089.ab1   180 
  254  C MoSU013R_D11_BE444125As02P005A06P005A121R1_089.ab1   422 
  558    MoSU013F_D11_BE444125As02P005A06P005A121F1_089.ab1   488 
  562  C MoSU013R_D11_BE444125As02P005A06P005A121R1_089.ab1   114 
  578    MoSU013F_D11_BE444125As02P005A06P005A121F1_089.ab1   508 
  594  C MoSU013R_D11_BE444125As02P005A06P005A121R1_089.ab1    82 
  598    MoSU013F_D11_BE444125As02P005A06P005A121F1_089.ab1   528 
  664  C MoSU013R_D11_BE444125As02P005A06P005A121R1_089.ab1    13 
  668    MoSU013F_D11_BE444125As02P005A06P005A121F1_089.ab1   598 
Contig length: old 744, new 745

Contig length: old 745, new 745
New start: 0