No. words: 1362; after pruning: 1308


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    9    0.0 11.5 (1,1:577)  537  0.53 0.00 0.35  MoSU013F_G11_BE444125Ld01P005A06P005A121F1_083.ab1       10   579 (57)  C MoSU013R_G11_BE444125Ld01P005A06P005A121R1_083.ab1   (158)   568     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 9       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1  C MoSU013R_G11_BE444125Ld01P005A06P005A121R1_083.ab1   726 
  202    MoSU013F_G11_BE444125Ld01P005A06P005A121F1_083.ab1    53 
  214  C MoSU013R_G11_BE444125Ld01P005A06P005A121R1_083.ab1   513 
  646    MoSU013F_G11_BE444125Ld01P005A06P005A121F1_083.ab1   497 
  650  C MoSU013R_G11_BE444125Ld01P005A06P005A121R1_083.ab1    77 
  654    MoSU013F_G11_BE444125Ld01P005A06P005A121F1_083.ab1   505 
  680  C MoSU013R_G11_BE444125Ld01P005A06P005A121R1_083.ab1    48 
  692    MoSU013F_G11_BE444125Ld01P005A06P005A121F1_083.ab1   543 
Contig length: old 784, new 785

Contig length: old 785, new 785
New start: 0 
S Change at: 61; seg lengths: entry 1, contig 1
S Change at: 127; seg lengths: entry 1, contig 1