No. words: 1424; after pruning: 1398


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    9    0.0 11.1 (1,1:565)  522  0.90 0.00 0.18  MoSU013F_A12_BE444125Ld02P005A06P005A121F1_096.ab1       10   566 (143)  C MoSU013R_A12_BE444125Ld02P005A06P005A121R1_096.ab1   (159)   556     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 9       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C MoSU013R_A12_BE444125Ld02P005A06P005A121R1_096.ab1   715 
  631    MoSU013F_A12_BE444125Ld02P005A06P005A121F1_096.ab1   481 
  639  C MoSU013R_A12_BE444125Ld02P005A06P005A121R1_096.ab1    77 
  651    MoSU013F_A12_BE444125Ld02P005A06P005A121F1_096.ab1   501 
Contig length: old 858, new 859

Contig length: old 859, new 859
New start: 0