No. words: 1468; after pruning: 1442


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   11    0.0 11.7 (1,1:582)  552  0.00 0.00 0.17  MoSU013F_B12_BE444125Ld03P005A06P005A121F1_094.ab1       12   583 (155)  C MoSU013R_B12_BE444125Ld03P005A06P005A121R1_094.ab1   (159)   571     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
11       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C MoSU013R_B12_BE444125Ld03P005A06P005A121R1_094.ab1   730 
  619    MoSU013F_B12_BE444125Ld03P005A06P005A121F1_094.ab1   471 
  623  C MoSU013R_B12_BE444125Ld03P005A06P005A121R1_094.ab1   108 
  635    MoSU013F_B12_BE444125Ld03P005A06P005A121F1_094.ab1   487 
  639  C MoSU013R_B12_BE444125Ld03P005A06P005A121R1_094.ab1    92 
  655    MoSU013F_B12_BE444125Ld03P005A06P005A121F1_094.ab1   507 
  663  C MoSU013R_B12_BE444125Ld03P005A06P005A121R1_094.ab1    68 
  675    MoSU013F_B12_BE444125Ld03P005A06P005A121F1_094.ab1   527 
  679  C MoSU013R_B12_BE444125Ld03P005A06P005A121R1_094.ab1    52 
  691    MoSU013F_B12_BE444125Ld03P005A06P005A121F1_094.ab1   543 
  699  C MoSU013R_B12_BE444125Ld03P005A06P005A121R1_094.ab1    32 
  703    MoSU013F_B12_BE444125Ld03P005A06P005A121F1_094.ab1   555 
Contig length: old 885, new 886

Contig length: old 886, new 886
New start: 0