No. words: 1446; after pruning: 1420


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:562)  528  0.53 0.00 0.53  MoSU013F_C12_BE444125Ld04P005A06P005A121F1_092.ab1        1   565 (151)  C MoSU013R_C12_BE444125Ld04P005A06P005A121R1_092.ab1   (168)   562     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1  C MoSU013R_C12_BE444125Ld04P005A06P005A121R1_092.ab1   730 
  583    MoSU013F_C12_BE444125Ld04P005A06P005A121F1_092.ab1   415 
  587  C MoSU013R_C12_BE444125Ld04P005A06P005A121R1_092.ab1   144 
  639    MoSU013F_C12_BE444125Ld04P005A06P005A121F1_092.ab1   471 
  647  C MoSU013R_C12_BE444125Ld04P005A06P005A121R1_092.ab1    84 
  663    MoSU013F_C12_BE444125Ld04P005A06P005A121F1_092.ab1   495 
  689  C MoSU013R_C12_BE444125Ld04P005A06P005A121R1_092.ab1    43 
  697    MoSU013F_C12_BE444125Ld04P005A06P005A121F1_092.ab1   529 
  705  C MoSU013R_C12_BE444125Ld04P005A06P005A121R1_092.ab1    27 
  709    MoSU013F_C12_BE444125Ld04P005A06P005A121F1_092.ab1   541 
Contig length: old 883, new 884

Contig length: old 884, new 884
New start: 0