No. words: 1461; after pruning: 1435


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   11    0.0 11.6 (1,1:576)  546  0.00 0.00 0.18  MoSU013F_D12_BE444125Ld05P005A06P005A121F1_090.ab1       12   577 (162)  C MoSU013R_D12_BE444125Ld05P005A06P005A121R1_090.ab1   (157)   565     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
11       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C MoSU013R_D12_BE444125Ld05P005A06P005A121R1_090.ab1   722 
  669    MoSU013F_D12_BE444125Ld05P005A06P005A121F1_090.ab1   523 
  677  C MoSU013R_D12_BE444125Ld05P005A06P005A121R1_090.ab1    46 
  689    MoSU013F_D12_BE444125Ld05P005A06P005A121F1_090.ab1   543 
Contig length: old 884, new 885

Contig length: old 885, new 885
New start: 0