No. words: 1021; after pruning: 995


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.6 (1,1:575)  258  1.39 0.00 0.70  MoSU013F_E12_BE444125Ld06P005A06P005A121F1_088.ab1      291   577 (159)  C MoSU013R_E12_BE444125Ld06P005A06P005A121R1_088.ab1   (0)   285     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  134 nodes

 69 str. conn. components

Path
    1    MoSU013F_E12_BE444125Ld06P005A06P005A121F1_088.ab1     1 
  383  C MoSU013R_E12_BE444125Ld06P005A06P005A121R1_088.ab1   194 
  387    MoSU013F_E12_BE444125Ld06P005A06P005A121F1_088.ab1   387 
  435  C MoSU013R_E12_BE444125Ld06P005A06P005A121R1_088.ab1   142 
  439    MoSU013F_E12_BE444125Ld06P005A06P005A121F1_088.ab1   439 
  447  C MoSU013R_E12_BE444125Ld06P005A06P005A121R1_088.ab1   130 
  475    MoSU013F_E12_BE444125Ld06P005A06P005A121F1_088.ab1   475 
  491  C MoSU013R_E12_BE444125Ld06P005A06P005A121R1_088.ab1    86 
  503    MoSU013F_E12_BE444125Ld06P005A06P005A121F1_088.ab1   503 
  531  C MoSU013R_E12_BE444125Ld06P005A06P005A121R1_088.ab1    46 
  539    MoSU013F_E12_BE444125Ld06P005A06P005A121F1_088.ab1   539 
Contig length: old 736, new 736

Contig length: old 736, new 736
New start: 0