No. words: 1173; after pruning: 1133


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.9 (1,1:544)  527  0.37 0.00 0.00  MoSU013F_A11_BE444125Tu01P005A06P005A121F1_095.ab1        1   545 (29)  C MoSU013R_A11_BE444125Tu01P005A06P005A121R1_095.ab1   (54)   545     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1  C MoSU013R_A11_BE444125Tu01P005A06P005A121R1_095.ab1   599 
   70    MoSU013F_A11_BE444125Tu01P005A06P005A121F1_095.ab1    16 
   80  C MoSU013R_A11_BE444125Tu01P005A06P005A121R1_095.ab1   520 
  148    MoSU013F_A11_BE444125Tu01P005A06P005A121F1_095.ab1    94 
  152  C MoSU013R_A11_BE444125Tu01P005A06P005A121R1_095.ab1   448 
  240    MoSU013F_A11_BE444125Tu01P005A06P005A121F1_095.ab1   186 
  248  C MoSU013R_A11_BE444125Tu01P005A06P005A121R1_095.ab1   352 
  440    MoSU013F_A11_BE444125Tu01P005A06P005A121F1_095.ab1   386 
  472  C MoSU013R_A11_BE444125Tu01P005A06P005A121R1_095.ab1   128 
  480    MoSU013F_A11_BE444125Tu01P005A06P005A121F1_095.ab1   426 
  532  C MoSU013R_A11_BE444125Tu01P005A06P005A121R1_095.ab1    68 
  540    MoSU013F_A11_BE444125Tu01P005A06P005A121F1_095.ab1   486 
  548  C MoSU013R_A11_BE444125Tu01P005A06P005A121R1_095.ab1    52 
  560    MoSU013F_A11_BE444125Tu01P005A06P005A121F1_095.ab1   506 
  572  C MoSU013R_A11_BE444125Tu01P005A06P005A121R1_095.ab1    28 
  592    MoSU013F_A11_BE444125Tu01P005A06P005A121F1_095.ab1   538 
Contig length: old 628, new 628

Contig length: old 628, new 628
New start: 0