No. words: 1189; after pruning: 1163


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.9 (1,1:512)  471  0.78 0.59 0.00  MoSU003F_G09_BE444301Ld01P005E04E101F1_068.ab1        1   512 (50)  C MoSU003R_G09_BE444301Ld01P005E04E101R1_068.ab1   (112)   515     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C MoSU003R_G09_BE444301Ld01P005E04E101R1_068.ab1   627 
  195    MoSU003F_G09_BE444301Ld01P005E04E101F1_068.ab1    81 
  199  C MoSU003R_G09_BE444301Ld01P005E04E101R1_068.ab1   429 
  207    MoSU003F_G09_BE444301Ld01P005E04E101F1_068.ab1    93 
  211  C MoSU003R_G09_BE444301Ld01P005E04E101R1_068.ab1   417 
  367    MoSU003F_G09_BE444301Ld01P005E04E101F1_068.ab1   253 
  395  C MoSU003R_G09_BE444301Ld01P005E04E101R1_068.ab1   233 
  447    MoSU003F_G09_BE444301Ld01P005E04E101F1_068.ab1   333 
  451  C MoSU003R_G09_BE444301Ld01P005E04E101R1_068.ab1   177 
  475    MoSU003F_G09_BE444301Ld01P005E04E101F1_068.ab1   361 
  479  C MoSU003R_G09_BE444301Ld01P005E04E101R1_068.ab1   149 
  512    MoSU003F_G09_BE444301Ld01P005E04E101F1_068.ab1   398 
  516  C MoSU003R_G09_BE444301Ld01P005E04E101R1_068.ab1   112 
  600    MoSU003F_G09_BE444301Ld01P005E04E101F1_068.ab1   486 
  610  C MoSU003R_G09_BE444301Ld01P005E04E101R1_068.ab1    17 
  614    MoSU003F_G09_BE444301Ld01P005E04E101F1_068.ab1   500 
  618  C MoSU003R_G09_BE444301Ld01P005E04E101R1_068.ab1     9 
  622    MoSU003F_G09_BE444301Ld01P005E04E101F1_068.ab1   508 
Contig length: old 676, new 676

Contig length: old 676, new 676
New start: 0