No. words: 1120; after pruning: 1094


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 5.0 (1,1:424)  396  0.48 0.24 0.00  MoSU003F_B10_BE444301Ld04P005E04E101F1_077.ab1        9   425 (147)  C MoSU003R_B10_BE444301Ld04P005E04E101R1_077.ab1   (130)   418     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  202 nodes

 103 str. conn. components

Path
    1  C MoSU003R_B10_BE444301Ld04P005E04E101R1_077.ab1   548 
  293    MoSU003F_B10_BE444301Ld04P005E04E101F1_077.ab1   170 
  305  C MoSU003R_B10_BE444301Ld04P005E04E101R1_077.ab1   244 
  345    MoSU003F_B10_BE444301Ld04P005E04E101F1_077.ab1   222 
  353  C MoSU003R_B10_BE444301Ld04P005E04E101R1_077.ab1   196 
  357    MoSU003F_B10_BE444301Ld04P005E04E101F1_077.ab1   234 
  461  C MoSU003R_B10_BE444301Ld04P005E04E101R1_077.ab1    88 
  465    MoSU003F_B10_BE444301Ld04P005E04E101F1_077.ab1   342 
  481  C MoSU003R_B10_BE444301Ld04P005E04E101R1_077.ab1    68 
  485    MoSU003F_B10_BE444301Ld04P005E04E101F1_077.ab1   362 
  513  C MoSU003R_B10_BE444301Ld04P005E04E101R1_077.ab1    36 
  517    MoSU003F_B10_BE444301Ld04P005E04E101F1_077.ab1   394 
Contig length: old 695, new 695

Contig length: old 695, new 695
New start: 0