No. words: 1278; after pruning: 1252


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:511)  472  0.39 0.59 0.20  MoSU003F_C10_BE444301Ld05P005E04E101F1_070.ab1        1   512 (131)  C MoSU003R_C10_BE444301Ld05P005E04E101R1_070.ab1   (121)   514     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU003R_C10_BE444301Ld05P005E04E101R1_070.ab1   635 
  176    MoSU003F_C10_BE444301Ld05P005E04E101F1_070.ab1    52 
  180  C MoSU003R_C10_BE444301Ld05P005E04E101R1_070.ab1   456 
  188    MoSU003F_C10_BE444301Ld05P005E04E101F1_070.ab1    64 
  192  C MoSU003R_C10_BE444301Ld05P005E04E101R1_070.ab1   444 
  272    MoSU003F_C10_BE444301Ld05P005E04E101F1_070.ab1   149 
  276  C MoSU003R_C10_BE444301Ld05P005E04E101R1_070.ab1   360 
  288    MoSU003F_C10_BE444301Ld05P005E04E101F1_070.ab1   165 
  296  C MoSU003R_C10_BE444301Ld05P005E04E101R1_070.ab1   340 
  300    MoSU003F_C10_BE444301Ld05P005E04E101F1_070.ab1   177 
  336  C MoSU003R_C10_BE444301Ld05P005E04E101R1_070.ab1   300 
  344    MoSU003F_C10_BE444301Ld05P005E04E101F1_070.ab1   221 
  352  C MoSU003R_C10_BE444301Ld05P005E04E101R1_070.ab1   284 
  360    MoSU003F_C10_BE444301Ld05P005E04E101F1_070.ab1   237 
  368  C MoSU003R_C10_BE444301Ld05P005E04E101R1_070.ab1   268 
  372    MoSU003F_C10_BE444301Ld05P005E04E101F1_070.ab1   249 
  380  C MoSU003R_C10_BE444301Ld05P005E04E101R1_070.ab1   256 
  392    MoSU003F_C10_BE444301Ld05P005E04E101F1_070.ab1   269 
  456  C MoSU003R_C10_BE444301Ld05P005E04E101R1_070.ab1   180 
  464    MoSU003F_C10_BE444301Ld05P005E04E101F1_070.ab1   341 
  508  C MoSU003R_C10_BE444301Ld05P005E04E101R1_070.ab1   128 
  516    MoSU003F_C10_BE444301Ld05P005E04E101F1_070.ab1   393 
  528  C MoSU003R_C10_BE444301Ld05P005E04E101R1_070.ab1   108 
  540    MoSU003F_C10_BE444301Ld05P005E04E101F1_070.ab1   417 
  548  C MoSU003R_C10_BE444301Ld05P005E04E101R1_070.ab1    88 
  629    MoSU003F_C10_BE444301Ld05P005E04E101F1_070.ab1   506 
Contig length: old 766, new 766

Contig length: old 766, new 766
New start: 0