No. words: 1116; after pruning: 1090


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.6 (1,1:417)  402  0.00 0.24 0.00  MoSU003F_D10_BE444301Ld06P005E04E101F1_078.ab1        2   418 (149)  C MoSU003R_D10_BE444301Ld06P005E04E101R1_078.ab1   (131)   418     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C MoSU003R_D10_BE444301Ld06P005E04E101R1_078.ab1   549 
  158    MoSU003F_D10_BE444301Ld06P005E04E101F1_078.ab1    27 
  162  C MoSU003R_D10_BE444301Ld06P005E04E101R1_078.ab1   388 
  266    MoSU003F_D10_BE444301Ld06P005E04E101F1_078.ab1   135 
  270  C MoSU003R_D10_BE444301Ld06P005E04E101R1_078.ab1   280 
  294    MoSU003F_D10_BE444301Ld06P005E04E101F1_078.ab1   163 
  298  C MoSU003R_D10_BE444301Ld06P005E04E101R1_078.ab1   252 
  354    MoSU003F_D10_BE444301Ld06P005E04E101F1_078.ab1   223 
  358  C MoSU003R_D10_BE444301Ld06P005E04E101R1_078.ab1   192 
  378    MoSU003F_D10_BE444301Ld06P005E04E101F1_078.ab1   247 
  386  C MoSU003R_D10_BE444301Ld06P005E04E101R1_078.ab1   164 
  390    MoSU003F_D10_BE444301Ld06P005E04E101F1_078.ab1   259 
  450  C MoSU003R_D10_BE444301Ld06P005E04E101R1_078.ab1   100 
  458    MoSU003F_D10_BE444301Ld06P005E04E101F1_078.ab1   327 
  486  C MoSU003R_D10_BE444301Ld06P005E04E101R1_078.ab1    64 
  494    MoSU003F_D10_BE444301Ld06P005E04E101F1_078.ab1   363 
  498  C MoSU003R_D10_BE444301Ld06P005E04E101R1_078.ab1    52 
  502    MoSU003F_D10_BE444301Ld06P005E04E101F1_078.ab1   371 
  510  C MoSU003R_D10_BE444301Ld06P005E04E101R1_078.ab1    40 
  518    MoSU003F_D10_BE444301Ld06P005E04E101F1_078.ab1   387 
Contig length: old 698, new 698

Contig length: old 698, new 698
New start: 0