No. words: 1115; after pruning: 1089


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:417)  403  0.00 0.24 0.00  MoSU003F_F10_BE444301Ld08P005E04E101F1_079.ab1        2   418 (147)  C MoSU003R_F10_BE444301Ld08P005E04E101R1_079.ab1   (132)   418     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C MoSU003R_F10_BE444301Ld08P005E04E101R1_079.ab1   550 
  195    MoSU003F_F10_BE444301Ld08P005E04E101F1_079.ab1    63 
  199  C MoSU003R_F10_BE444301Ld08P005E04E101R1_079.ab1   352 
  355    MoSU003F_F10_BE444301Ld08P005E04E101F1_079.ab1   223 
  367  C MoSU003R_F10_BE444301Ld08P005E04E101R1_079.ab1   184 
  379    MoSU003F_F10_BE444301Ld08P005E04E101F1_079.ab1   247 
  383  C MoSU003R_F10_BE444301Ld08P005E04E101R1_079.ab1   168 
  407    MoSU003F_F10_BE444301Ld08P005E04E101F1_079.ab1   275 
  451  C MoSU003R_F10_BE444301Ld08P005E04E101R1_079.ab1   100 
  467    MoSU003F_F10_BE444301Ld08P005E04E101F1_079.ab1   335 
  479  C MoSU003R_F10_BE444301Ld08P005E04E101R1_079.ab1    72 
  487    MoSU003F_F10_BE444301Ld08P005E04E101F1_079.ab1   355 
  507  C MoSU003R_F10_BE444301Ld08P005E04E101R1_079.ab1    44 
  523    MoSU003F_F10_BE444301Ld08P005E04E101F1_079.ab1   391 
Contig length: old 697, new 697

Contig length: old 697, new 697
New start: 0