No. words: 1132; after pruning: 1106


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:431)  410  0.23 0.46 0.00  MoSU003F_G10_BE444301Ld09P005E04E101F1_072.ab1        1   431 (149)  C MoSU003R_G10_BE444301Ld09P005E04E101R1_072.ab1   (119)   433     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  210 nodes

 107 str. conn. components

Path
    1  C MoSU003R_G10_BE444301Ld09P005E04E101R1_072.ab1   552 
  196    MoSU003F_G10_BE444301Ld09P005E04E101F1_072.ab1    75 
  208  C MoSU003R_G10_BE444301Ld09P005E04E101R1_072.ab1   345 
  320    MoSU003F_G10_BE444301Ld09P005E04E101F1_072.ab1   199 
  372  C MoSU003R_G10_BE444301Ld09P005E04E101R1_072.ab1   181 
  380    MoSU003F_G10_BE444301Ld09P005E04E101F1_072.ab1   259 
  388  C MoSU003R_G10_BE444301Ld09P005E04E101R1_072.ab1   165 
  404    MoSU003F_G10_BE444301Ld09P005E04E101F1_072.ab1   283 
  472  C MoSU003R_G10_BE444301Ld09P005E04E101R1_072.ab1    81 
  476    MoSU003F_G10_BE444301Ld09P005E04E101F1_072.ab1   355 
  480  C MoSU003R_G10_BE444301Ld09P005E04E101R1_072.ab1    73 
  496    MoSU003F_G10_BE444301Ld09P005E04E101F1_072.ab1   375 
  500  C MoSU003R_G10_BE444301Ld09P005E04E101R1_072.ab1    53 
  508    MoSU003F_G10_BE444301Ld09P005E04E101F1_072.ab1   387 
  516  C MoSU003R_G10_BE444301Ld09P005E04E101R1_072.ab1    37 
  520    MoSU003F_G10_BE444301Ld09P005E04E101F1_072.ab1   399 
Contig length: old 700, new 701

Contig length: old 701, new 701
New start: 0