No. words: 743; after pruning: 717


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.9 (1,1:313)  301  0.00 0.32 0.00  MoSU018F_F11_BE444301Ta16P023G09P005E101F1_085.ab1        1   314 (50)  C MoSU018R_F11_BE444301Ta16P023G09P005E101R1_085.ab1   (64)   315     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  156 nodes

 80 str. conn. components

Path
    1  C MoSU018R_F11_BE444301Ta16P023G09P005E101R1_085.ab1   379 
   90    MoSU018F_F11_BE444301Ta16P023G09P005E101F1_085.ab1    25 
  138  C MoSU018R_F11_BE444301Ta16P023G09P005E101R1_085.ab1   242 
  150    MoSU018F_F11_BE444301Ta16P023G09P005E101F1_085.ab1    85 
  158  C MoSU018R_F11_BE444301Ta16P023G09P005E101R1_085.ab1   222 
  162    MoSU018F_F11_BE444301Ta16P023G09P005E101F1_085.ab1    97 
  182  C MoSU018R_F11_BE444301Ta16P023G09P005E101R1_085.ab1   198 
  186    MoSU018F_F11_BE444301Ta16P023G09P005E101F1_085.ab1   121 
  202  C MoSU018R_F11_BE444301Ta16P023G09P005E101R1_085.ab1   178 
  210    MoSU018F_F11_BE444301Ta16P023G09P005E101F1_085.ab1   145 
  338  C MoSU018R_F11_BE444301Ta16P023G09P005E101R1_085.ab1    42 
  342    MoSU018F_F11_BE444301Ta16P023G09P005E101F1_085.ab1   277 
Contig length: old 429, new 429

Contig length: old 429, new 429
New start: 0