No. words: 1046; after pruning: 1020


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:482)  463  0.21 0.00 0.00  MoSU003F_B09_BE444301Tu02P005E04E101F1_073.ab1        1   483 (42)  C MoSU003R_B09_BE444301Tu02P005E04E101R1_073.ab1   (38)   483     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C MoSU003R_B09_BE444301Tu02P005E04E101R1_073.ab1   521 
   87    MoSU003F_B09_BE444301Tu02P005E04E101F1_073.ab1    49 
   95  C MoSU003R_B09_BE444301Tu02P005E04E101R1_073.ab1   427 
   99    MoSU003F_B09_BE444301Tu02P005E04E101F1_073.ab1    61 
  103  C MoSU003R_B09_BE444301Tu02P005E04E101R1_073.ab1   419 
  175    MoSU003F_B09_BE444301Tu02P005E04E101F1_073.ab1   137 
  179  C MoSU003R_B09_BE444301Tu02P005E04E101R1_073.ab1   343 
  203    MoSU003F_B09_BE444301Tu02P005E04E101F1_073.ab1   165 
  207  C MoSU003R_B09_BE444301Tu02P005E04E101R1_073.ab1   315 
  283    MoSU003F_B09_BE444301Tu02P005E04E101F1_073.ab1   245 
  295  C MoSU003R_B09_BE444301Tu02P005E04E101R1_073.ab1   227 
  303    MoSU003F_B09_BE444301Tu02P005E04E101F1_073.ab1   265 
  315  C MoSU003R_B09_BE444301Tu02P005E04E101R1_073.ab1   207 
  323    MoSU003F_B09_BE444301Tu02P005E04E101F1_073.ab1   285 
  431  C MoSU003R_B09_BE444301Tu02P005E04E101R1_073.ab1    91 
  439    MoSU003F_B09_BE444301Tu02P005E04E101F1_073.ab1   401 
  447  C MoSU003R_B09_BE444301Tu02P005E04E101R1_073.ab1    75 
  491    MoSU003F_B09_BE444301Tu02P005E04E101F1_073.ab1   453 
  495  C MoSU003R_B09_BE444301Tu02P005E04E101R1_073.ab1    27 
  499    MoSU003F_B09_BE444301Tu02P005E04E101F1_073.ab1   461 
Contig length: old 563, new 563

Contig length: old 563, new 563
New start: 0