No. words: 1189; after pruning: 1163


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.9 (1,1:421)  407  0.95 0.00 0.00  MoSU022F_H05_BE444691Ld02P005B06P005B121F1_033.ab1        1   422 (176)  C MoSU022R_H05_BE444691Ld02P005B06P005B121R1_033.ab1   (169)   422     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  202 nodes

 103 str. conn. components

Path
    1  C MoSU022R_H05_BE444691Ld02P005B06P005B121R1_033.ab1   591 
  387    MoSU022F_H05_BE444691Ld02P005B06P005B121F1_033.ab1   218 
  395  C MoSU022R_H05_BE444691Ld02P005B06P005B121R1_033.ab1   197 
  439    MoSU022F_H05_BE444691Ld02P005B06P005B121F1_033.ab1   270 
  447  C MoSU022R_H05_BE444691Ld02P005B06P005B121R1_033.ab1   145 
  459    MoSU022F_H05_BE444691Ld02P005B06P005B121F1_033.ab1   290 
  511  C MoSU022R_H05_BE444691Ld02P005B06P005B121R1_033.ab1    81 
  515    MoSU022F_H05_BE444691Ld02P005B06P005B121F1_033.ab1   346 
  554  C MoSU022R_H05_BE444691Ld02P005B06P005B121R1_033.ab1    38 
  566    MoSU022F_H05_BE444691Ld02P005B06P005B121F1_033.ab1   397 
Contig length: old 767, new 767

Contig length: old 767, new 767
New start: 0