No. words: 1112; after pruning: 1086


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.0 (1,1:387)  373  0.00 0.26 0.26  MoSU022F_A06_BE444691Ld03P005B06P005B121F1_048.ab1        1   388 (176)  C MoSU022R_A06_BE444691Ld03P005B06P005B121R1_048.ab1   (160)   388     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  190 nodes

 97 str. conn. components

Path
    1  C MoSU022R_A06_BE444691Ld03P005B06P005B121R1_048.ab1   548 
  435    MoSU022F_A06_BE444691Ld03P005B06P005B121F1_048.ab1   274 
  511  C MoSU022R_A06_BE444691Ld03P005B06P005B121R1_048.ab1    38 
  519    MoSU022F_A06_BE444691Ld03P005B06P005B121F1_048.ab1   358 
Contig length: old 724, new 725

Contig length: old 725, new 725
New start: 0