No. words: 1572; after pruning: 1546


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.6 (1,1:1168)  390  0.50 0.00 0.00  MoSU035F_D11_BE445287As02P019B05P019B111F1_089.ab1      394   796 (0)  C MoSU035R_D11_BE445287As02P019B05P019B111R1_089.ab1   (0)   776   374 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1    MoSU035F_D11_BE445287As02P019B05P019B111F1_089.ab1     1 
  641  C MoSU035R_D11_BE445287As02P019B05P019B111R1_089.ab1   529 
  645    MoSU035F_D11_BE445287As02P019B05P019B111F1_089.ab1   645 
  653  C MoSU035R_D11_BE445287As02P019B05P019B111R1_089.ab1   517 
  699    MoSU035F_D11_BE445287As02P019B05P019B111F1_089.ab1   699 
  707  C MoSU035R_D11_BE445287As02P019B05P019B111R1_089.ab1   463 
  711    MoSU035F_D11_BE445287As02P019B05P019B111F1_089.ab1   711 
  715  C MoSU035R_D11_BE445287As02P019B05P019B111R1_089.ab1   455 
  759    MoSU035F_D11_BE445287As02P019B05P019B111F1_089.ab1   759 
  763  C MoSU035R_D11_BE445287As02P019B05P019B111R1_089.ab1   407 
Contig length: old 1169, new 1169

Contig length: old 1169, new 1169
New start: 0