No. words: 1772; after pruning: 1746


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:1024)  711  1.07 0.00 0.00  MoSU035F_E11_BE445287At01P019B05P019B111F1_087.ab1      159   905 (0)  C MoSU035R_E11_BE445287At01P019B05P019B111R1_087.ab1   (0)   867   121 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  352 nodes

 178 str. conn. components

Path
    1    MoSU035F_E11_BE445287At01P019B05P019B111F1_087.ab1     1 
  694  C MoSU035R_E11_BE445287At01P019B05P019B111R1_087.ab1   332 
  706    MoSU035F_E11_BE445287At01P019B05P019B111F1_087.ab1   706 
  762  C MoSU035R_E11_BE445287At01P019B05P019B111R1_087.ab1   264 
  770    MoSU035F_E11_BE445287At01P019B05P019B111F1_087.ab1   770 
  798  C MoSU035R_E11_BE445287At01P019B05P019B111R1_087.ab1   228 
  802    MoSU035F_E11_BE445287At01P019B05P019B111F1_087.ab1   802 
  806  C MoSU035R_E11_BE445287At01P019B05P019B111R1_087.ab1   220 
  814    MoSU035F_E11_BE445287At01P019B05P019B111F1_087.ab1   814 
  834  C MoSU035R_E11_BE445287At01P019B05P019B111R1_087.ab1   192 
  842    MoSU035F_E11_BE445287At01P019B05P019B111F1_087.ab1   842 
  854  C MoSU035R_E11_BE445287At01P019B05P019B111R1_087.ab1   172 
  880    MoSU035F_E11_BE445287At01P019B05P019B111F1_087.ab1   880 
  892  C MoSU035R_E11_BE445287At01P019B05P019B111R1_087.ab1   134 
Contig length: old 1025, new 1025

Contig length: old 1025, new 1025
New start: 0 
S Change at: 868; seg lengths: entry 1, contig 1