No. words: 1562; after pruning: 1536


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:1046)  495  0.78 0.00 0.00  MoSU035F_G11_BE445287Ld01P019B05P019B111F1_083.ab1      182   696 (0)  C MoSU035R_G11_BE445287Ld01P019B05P019B111R1_083.ab1   (0)   866   352 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1    MoSU035F_G11_BE445287Ld01P019B05P019B111F1_083.ab1     1 
  350  C MoSU035R_G11_BE445287Ld01P019B05P019B111R1_083.ab1   698 
  354    MoSU035F_G11_BE445287Ld01P019B05P019B111F1_083.ab1   354 
  378  C MoSU035R_G11_BE445287Ld01P019B05P019B111R1_083.ab1   670 
  390    MoSU035F_G11_BE445287Ld01P019B05P019B111F1_083.ab1   390 
  402  C MoSU035R_G11_BE445287Ld01P019B05P019B111R1_083.ab1   646 
  418    MoSU035F_G11_BE445287Ld01P019B05P019B111F1_083.ab1   418 
  422  C MoSU035R_G11_BE445287Ld01P019B05P019B111R1_083.ab1   626 
Contig length: old 1047, new 1047

Contig length: old 1047, new 1047
New start: 0