No. words: 1727; after pruning: 1673


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.6 (1,1:1055)  653  0.60 0.00 0.00  MoSU035F_A12_BE445287Ld02P019B05P019B111F1_096.ab1      182   852 (0)  C MoSU035R_A12_BE445287Ld02P019B05P019B111R1_096.ab1   (0)   875   205 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1    MoSU035F_A12_BE445287Ld02P019B05P019B111F1_096.ab1     1 
  389  C MoSU035R_A12_BE445287Ld02P019B05P019B111R1_096.ab1   668 
  393    MoSU035F_A12_BE445287Ld02P019B05P019B111F1_096.ab1   393 
  455  C MoSU035R_A12_BE445287Ld02P019B05P019B111R1_096.ab1   602 
  519    MoSU035F_A12_BE445287Ld02P019B05P019B111F1_096.ab1   519 
  527  C MoSU035R_A12_BE445287Ld02P019B05P019B111R1_096.ab1   530 
  567    MoSU035F_A12_BE445287Ld02P019B05P019B111F1_096.ab1   567 
  575  C MoSU035R_A12_BE445287Ld02P019B05P019B111R1_096.ab1   482 
  619    MoSU035F_A12_BE445287Ld02P019B05P019B111F1_096.ab1   619 
  635  C MoSU035R_A12_BE445287Ld02P019B05P019B111R1_096.ab1   422 
Contig length: old 1056, new 1056

Contig length: old 1056, new 1056
New start: 0