No. words: 1733; after pruning: 1707


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.0 (1,1:1043)  667  0.58 0.00 0.00  MoSU035F_B12_BE445287Ld03P019B05P019B111F1_094.ab1      175   863 (0)  C MoSU035R_B12_BE445287Ld03P019B05P019B111R1_094.ab1   (0)   870   182 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  334 nodes

 169 str. conn. components

Path
    1    MoSU035F_B12_BE445287Ld03P019B05P019B111F1_094.ab1     1 
  678  C MoSU035R_B12_BE445287Ld03P019B05P019B111R1_094.ab1   367 
  686    MoSU035F_B12_BE445287Ld03P019B05P019B111F1_094.ab1   686 
  706  C MoSU035R_B12_BE445287Ld03P019B05P019B111R1_094.ab1   339 
  738    MoSU035F_B12_BE445287Ld03P019B05P019B111F1_094.ab1   738 
  748  C MoSU035R_B12_BE445287Ld03P019B05P019B111R1_094.ab1   297 
  840    MoSU035F_B12_BE445287Ld03P019B05P019B111F1_094.ab1   840 
  844  C MoSU035R_B12_BE445287Ld03P019B05P019B111R1_094.ab1   201 
Contig length: old 1044, new 1044

Contig length: old 1044, new 1044
New start: 0