No. words: 1530; after pruning: 1504


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.7 (1,1:1049)  453  1.04 0.00 0.21  MoSU035F_G12_BE445287Ld08P019B05P019B111F1_084.ab1      281   760 (0)  C MoSU035R_G12_BE445287Ld08P019B05P019B111R1_084.ab1   (0)   770   292 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1    MoSU035F_G12_BE445287Ld08P019B05P019B111F1_084.ab1     1 
  424  C MoSU035R_G12_BE445287Ld08P019B05P019B111R1_084.ab1   627 
  428    MoSU035F_G12_BE445287Ld08P019B05P019B111F1_084.ab1   428 
  448  C MoSU035R_G12_BE445287Ld08P019B05P019B111R1_084.ab1   603 
  452    MoSU035F_G12_BE445287Ld08P019B05P019B111F1_084.ab1   452 
  460  C MoSU035R_G12_BE445287Ld08P019B05P019B111R1_084.ab1   591 
  464    MoSU035F_G12_BE445287Ld08P019B05P019B111F1_084.ab1   464 
  540  C MoSU035R_G12_BE445287Ld08P019B05P019B111R1_084.ab1   511 
  544    MoSU035F_G12_BE445287Ld08P019B05P019B111F1_084.ab1   544 
  552  C MoSU035R_G12_BE445287Ld08P019B05P019B111R1_084.ab1   499 
  560    MoSU035F_G12_BE445287Ld08P019B05P019B111F1_084.ab1   560 
  588  C MoSU035R_G12_BE445287Ld08P019B05P019B111R1_084.ab1   463 
  592    MoSU035F_G12_BE445287Ld08P019B05P019B111F1_084.ab1   592 
  596  C MoSU035R_G12_BE445287Ld08P019B05P019B111R1_084.ab1   455 
  612    MoSU035F_G12_BE445287Ld08P019B05P019B111F1_084.ab1   612 
  616  C MoSU035R_G12_BE445287Ld08P019B05P019B111R1_084.ab1   435 
  620    MoSU035F_G12_BE445287Ld08P019B05P019B111F1_084.ab1   620 
  628  C MoSU035R_G12_BE445287Ld08P019B05P019B111R1_084.ab1   423 
  636    MoSU035F_G12_BE445287Ld08P019B05P019B111F1_084.ab1   636 
  640  C MoSU035R_G12_BE445287Ld08P019B05P019B111R1_084.ab1   411 
  644    MoSU035F_G12_BE445287Ld08P019B05P019B111F1_084.ab1   644 
  648  C MoSU035R_G12_BE445287Ld08P019B05P019B111R1_084.ab1   403 
  676    MoSU035F_G12_BE445287Ld08P019B05P019B111F1_084.ab1   676 
  680  C MoSU035R_G12_BE445287Ld08P019B05P019B111R1_084.ab1   371 
Contig length: old 1050, new 1050

Contig length: old 1050, new 1050
New start: 0 
S Change at: 385; seg lengths: entry 1, contig 1