No. words: 1862; after pruning: 1766


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.1 (1,1:1036)  796  0.97 0.00 0.00  MoSU035F_A11_BE445287Tu01P019B05P019B111F1_095.ab1       96   920 (0)  C MoSU035R_A11_BE445287Tu01P019B05P019B111R1_095.ab1   (0)   942   118 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  392 nodes

 198 str. conn. components

Path
    1    MoSU035F_A11_BE445287Tu01P019B05P019B111F1_095.ab1     1 
  533  C MoSU035R_A11_BE445287Tu01P019B05P019B111R1_095.ab1   505 
  537    MoSU035F_A11_BE445287Tu01P019B05P019B111F1_095.ab1   537 
  597  C MoSU035R_A11_BE445287Tu01P019B05P019B111R1_095.ab1   441 
  613    MoSU035F_A11_BE445287Tu01P019B05P019B111F1_095.ab1   613 
  641  C MoSU035R_A11_BE445287Tu01P019B05P019B111R1_095.ab1   397 
  645    MoSU035F_A11_BE445287Tu01P019B05P019B111F1_095.ab1   645 
  657  C MoSU035R_A11_BE445287Tu01P019B05P019B111R1_095.ab1   381 
Contig length: old 1037, new 1037

Contig length: old 1037, new 1037
New start: 0