No. words: 1637; after pruning: 1611


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 14.3 (1,1:699)  673  0.00 0.14 0.00  MoSU002F_C12_BE446380Ld03P005G05G111F2_086.ab1        2   699 (117)  C MoSU002R_C12_BE446380Ld03P005G05G111R2_086.ab1   (122)   699     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1  C MoSU002R_C12_BE446380Ld03P005G05G111R2_086.ab1   821 
  130    MoSU002F_C12_BE446380Ld03P005G05G111F2_086.ab1     9 
  142  C MoSU002R_C12_BE446380Ld03P005G05G111R2_086.ab1   680 
  158    MoSU002F_C12_BE446380Ld03P005G05G111F2_086.ab1    37 
  414  C MoSU002R_C12_BE446380Ld03P005G05G111R2_086.ab1   407 
  418    MoSU002F_C12_BE446380Ld03P005G05G111F2_086.ab1   297 
  426  C MoSU002R_C12_BE446380Ld03P005G05G111R2_086.ab1   395 
  430    MoSU002F_C12_BE446380Ld03P005G05G111F2_086.ab1   309 
  438  C MoSU002R_C12_BE446380Ld03P005G05G111R2_086.ab1   383 
  446    MoSU002F_C12_BE446380Ld03P005G05G111F2_086.ab1   325 
  450  C MoSU002R_C12_BE446380Ld03P005G05G111R2_086.ab1   371 
  462    MoSU002F_C12_BE446380Ld03P005G05G111F2_086.ab1   341 
  466  C MoSU002R_C12_BE446380Ld03P005G05G111R2_086.ab1   355 
  518    MoSU002F_C12_BE446380Ld03P005G05G111F2_086.ab1   397 
  530  C MoSU002R_C12_BE446380Ld03P005G05G111R2_086.ab1   291 
  698    MoSU002F_C12_BE446380Ld03P005G05G111F2_086.ab1   577 
  706  C MoSU002R_C12_BE446380Ld03P005G05G111R2_086.ab1   115 
  718    MoSU002F_C12_BE446380Ld03P005G05G111F2_086.ab1   597 
  726  C MoSU002R_C12_BE446380Ld03P005G05G111R2_086.ab1    95 
  746    MoSU002F_C12_BE446380Ld03P005G05G111F2_086.ab1   625 
  750  C MoSU002R_C12_BE446380Ld03P005G05G111R2_086.ab1    71 
  790    MoSU002F_C12_BE446380Ld03P005G05G111F2_086.ab1   669 
  794  C MoSU002R_C12_BE446380Ld03P005G05G111R2_086.ab1    27 
  810    MoSU002F_C12_BE446380Ld03P005G05G111F2_086.ab1   689 
Contig length: old 937, new 937

Contig length: old 937, new 937
New start: 0