No. words: 1613; after pruning: 1587


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 13.5 (1,1:714)  678  0.00 0.28 0.00  MoSU002F_E12_BE446380Ld05P005G05G111F2_087.ab1        1   708 (98)  C MoSU002R_E12_BE446380Ld05P005G05G111R2_087.ab1   (91)   716     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  350 nodes

 177 str. conn. components

Path
    1  C MoSU002R_E12_BE446380Ld05P005G05G111R2_087.ab1   807 
  106    MoSU002F_E12_BE446380Ld05P005G05G111F2_087.ab1    14 
  114  C MoSU002R_E12_BE446380Ld05P005G05G111R2_087.ab1   694 
  118    MoSU002F_E12_BE446380Ld05P005G05G111F2_087.ab1    26 
  170  C MoSU002R_E12_BE446380Ld05P005G05G111R2_087.ab1   638 
  174    MoSU002F_E12_BE446380Ld05P005G05G111F2_087.ab1    82 
  402  C MoSU002R_E12_BE446380Ld05P005G05G111R2_087.ab1   405 
  410    MoSU002F_E12_BE446380Ld05P005G05G111F2_087.ab1   318 
  418  C MoSU002R_E12_BE446380Ld05P005G05G111R2_087.ab1   389 
  438    MoSU002F_E12_BE446380Ld05P005G05G111F2_087.ab1   346 
  446  C MoSU002R_E12_BE446380Ld05P005G05G111R2_087.ab1   361 
  478    MoSU002F_E12_BE446380Ld05P005G05G111F2_087.ab1   386 
  486  C MoSU002R_E12_BE446380Ld05P005G05G111R2_087.ab1   321 
  674    MoSU002F_E12_BE446380Ld05P005G05G111F2_087.ab1   582 
  682  C MoSU002R_E12_BE446380Ld05P005G05G111R2_087.ab1   125 
  694    MoSU002F_E12_BE446380Ld05P005G05G111F2_087.ab1   602 
  698  C MoSU002R_E12_BE446380Ld05P005G05G111R2_087.ab1   109 
  794    MoSU002F_E12_BE446380Ld05P005G05G111F2_087.ab1   702 
Contig length: old 898, new 898

Contig length: old 898, new 898
New start: 0