No. words: 1508; after pruning: 1482


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 13.5 (1,1:721)  680  0.00 0.14 0.14  MoSU021F_C08_BE446380Ta11P020B11P005G111F1_060.ab1        1   716 (31)  C MoSU021R_C08_BE446380Ta11P020B11P005G111R1_060.ab1   (39)   722     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1  C MoSU021R_C08_BE446380Ta11P020B11P005G111R1_060.ab1   761 
   84    MoSU021F_C08_BE446380Ta11P020B11P005G111F1_060.ab1    44 
  116  C MoSU021R_C08_BE446380Ta11P020B11P005G111R1_060.ab1   646 
  124    MoSU021F_C08_BE446380Ta11P020B11P005G111F1_060.ab1    84 
  128  C MoSU021R_C08_BE446380Ta11P020B11P005G111R1_060.ab1   634 
  180    MoSU021F_C08_BE446380Ta11P020B11P005G111F1_060.ab1   140 
  272  C MoSU021R_C08_BE446380Ta11P020B11P005G111R1_060.ab1   490 
  280    MoSU021F_C08_BE446380Ta11P020B11P005G111F1_060.ab1   240 
  284  C MoSU021R_C08_BE446380Ta11P020B11P005G111R1_060.ab1   478 
  312    MoSU021F_C08_BE446380Ta11P020B11P005G111F1_060.ab1   272 
  552  C MoSU021R_C08_BE446380Ta11P020B11P005G111R1_060.ab1   210 
  704    MoSU021F_C08_BE446380Ta11P020B11P005G111F1_060.ab1   664 
Contig length: old 786, new 787

Contig length: old 787, new 787
New start: 0