No. words: 1497; after pruning: 1471


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.7 (1,1:717)  684  0.00 0.14 0.00  MoSU021F_G08_BE446380Ta15P020B11P005G111F1_052.ab1        4   718 (31)  C MoSU021R_G08_BE446380Ta15P020B11P005G111R1_052.ab1   (32)   716     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C MoSU021R_G08_BE446380Ta15P020B11P005G111R1_052.ab1   748 
   84    MoSU021F_G08_BE446380Ta15P020B11P005G111F1_052.ab1    54 
  108  C MoSU021R_G08_BE446380Ta15P020B11P005G111R1_052.ab1   641 
  112    MoSU021F_G08_BE446380Ta15P020B11P005G111F1_052.ab1    82 
  116  C MoSU021R_G08_BE446380Ta15P020B11P005G111R1_052.ab1   633 
  120    MoSU021F_G08_BE446380Ta15P020B11P005G111F1_052.ab1    90 
  124  C MoSU021R_G08_BE446380Ta15P020B11P005G111R1_052.ab1   625 
  152    MoSU021F_G08_BE446380Ta15P020B11P005G111F1_052.ab1   122 
  160  C MoSU021R_G08_BE446380Ta15P020B11P005G111R1_052.ab1   589 
  176    MoSU021F_G08_BE446380Ta15P020B11P005G111F1_052.ab1   146 
  256  C MoSU021R_G08_BE446380Ta15P020B11P005G111R1_052.ab1   493 
  264    MoSU021F_G08_BE446380Ta15P020B11P005G111F1_052.ab1   234 
  268  C MoSU021R_G08_BE446380Ta15P020B11P005G111R1_052.ab1   481 
  348    MoSU021F_G08_BE446380Ta15P020B11P005G111F1_052.ab1   318 
  352  C MoSU021R_G08_BE446380Ta15P020B11P005G111R1_052.ab1   397 
  652    MoSU021F_G08_BE446380Ta15P020B11P005G111F1_052.ab1   622 
  668  C MoSU021R_G08_BE446380Ta15P020B11P005G111R1_052.ab1    81 
  688    MoSU021F_G08_BE446380Ta15P020B11P005G111F1_052.ab1   658 
  692  C MoSU021R_G08_BE446380Ta15P020B11P005G111R1_052.ab1    57 
  708    MoSU021F_G08_BE446380Ta15P020B11P005G111F1_052.ab1   678 
Contig length: old 779, new 779

Contig length: old 779, new 779
New start: 0