No. words: 1501; after pruning: 1475


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.4 (1,1:717)  684  0.00 0.14 0.00  MoSU021F_B09_BE446380Ta18P020B11P005G111F1_077.ab1        4   718 (33)  C MoSU021R_B09_BE446380Ta18P020B11P005G111R1_077.ab1   (34)   716     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C MoSU021R_B09_BE446380Ta18P020B11P005G111R1_077.ab1   750 
   74    MoSU021F_B09_BE446380Ta18P020B11P005G111F1_077.ab1    42 
   78  C MoSU021R_B09_BE446380Ta18P020B11P005G111R1_077.ab1   673 
   82    MoSU021F_B09_BE446380Ta18P020B11P005G111F1_077.ab1    50 
  114  C MoSU021R_B09_BE446380Ta18P020B11P005G111R1_077.ab1   637 
  118    MoSU021F_B09_BE446380Ta18P020B11P005G111F1_077.ab1    86 
  206  C MoSU021R_B09_BE446380Ta18P020B11P005G111R1_077.ab1   545 
  210    MoSU021F_B09_BE446380Ta18P020B11P005G111F1_077.ab1   178 
  246  C MoSU021R_B09_BE446380Ta18P020B11P005G111R1_077.ab1   505 
  258    MoSU021F_B09_BE446380Ta18P020B11P005G111F1_077.ab1   226 
  314  C MoSU021R_B09_BE446380Ta18P020B11P005G111R1_077.ab1   437 
  318    MoSU021F_B09_BE446380Ta18P020B11P005G111F1_077.ab1   286 
  350  C MoSU021R_B09_BE446380Ta18P020B11P005G111R1_077.ab1   401 
  362    MoSU021F_B09_BE446380Ta18P020B11P005G111F1_077.ab1   330 
  378  C MoSU021R_B09_BE446380Ta18P020B11P005G111R1_077.ab1   373 
  510    MoSU021F_B09_BE446380Ta18P020B11P005G111F1_077.ab1   478 
  550  C MoSU021R_B09_BE446380Ta18P020B11P005G111R1_077.ab1   201 
  634    MoSU021F_B09_BE446380Ta18P020B11P005G111F1_077.ab1   602 
  650  C MoSU021R_B09_BE446380Ta18P020B11P005G111R1_077.ab1   101 
  654    MoSU021F_B09_BE446380Ta18P020B11P005G111F1_077.ab1   622 
  670  C MoSU021R_B09_BE446380Ta18P020B11P005G111R1_077.ab1    81 
  690    MoSU021F_B09_BE446380Ta18P020B11P005G111F1_077.ab1   658 
  694  C MoSU021R_B09_BE446380Ta18P020B11P005G111R1_077.ab1    57 
  714    MoSU021F_B09_BE446380Ta18P020B11P005G111F1_077.ab1   682 
Contig length: old 783, new 783

Contig length: old 783, new 783
New start: 0