No. words: 1502; after pruning: 1476


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.3 (1,1:716)  683  0.00 0.14 0.00  MoSU021F_C09_BE446380Ta19P020B11P005G111F1_075.ab1        4   717 (35)  C MoSU021R_C09_BE446380Ta19P020B11P005G111R1_075.ab1   (35)   715     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C MoSU021R_C09_BE446380Ta19P020B11P005G111R1_075.ab1   750 
   75    MoSU021F_C09_BE446380Ta19P020B11P005G111F1_075.ab1    42 
   79  C MoSU021R_C09_BE446380Ta19P020B11P005G111R1_075.ab1   672 
   83    MoSU021F_C09_BE446380Ta19P020B11P005G111F1_075.ab1    50 
  111  C MoSU021R_C09_BE446380Ta19P020B11P005G111R1_075.ab1   640 
  119    MoSU021F_C09_BE446380Ta19P020B11P005G111F1_075.ab1    86 
  127  C MoSU021R_C09_BE446380Ta19P020B11P005G111R1_075.ab1   624 
  191    MoSU021F_C09_BE446380Ta19P020B11P005G111F1_075.ab1   158 
  243  C MoSU021R_C09_BE446380Ta19P020B11P005G111R1_075.ab1   508 
  291    MoSU021F_C09_BE446380Ta19P020B11P005G111F1_075.ab1   258 
  299  C MoSU021R_C09_BE446380Ta19P020B11P005G111R1_075.ab1   452 
  635    MoSU021F_C09_BE446380Ta19P020B11P005G111F1_075.ab1   602 
  651  C MoSU021R_C09_BE446380Ta19P020B11P005G111R1_075.ab1   100 
  655    MoSU021F_C09_BE446380Ta19P020B11P005G111F1_075.ab1   622 
  671  C MoSU021R_C09_BE446380Ta19P020B11P005G111R1_075.ab1    80 
  691    MoSU021F_C09_BE446380Ta19P020B11P005G111F1_075.ab1   658 
  695  C MoSU021R_C09_BE446380Ta19P020B11P005G111R1_075.ab1    56 
  707    MoSU021F_C09_BE446380Ta19P020B11P005G111F1_075.ab1   674 
Contig length: old 785, new 785

Contig length: old 785, new 785
New start: 0