No. words: 1512; after pruning: 1486


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 12.2 (1,1:728)  688  0.00 0.14 0.00  MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1        5   723 (29)  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1   (34)   726     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1   760 
   62    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1    31 
   66  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1   695 
   74    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1    43 
   78  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1   683 
   98    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1    67 
  102  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1   659 
  106    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1    75 
  114  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1   647 
  118    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1    87 
  130  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1   631 
  134    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1   103 
  162  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1   599 
  170    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1   139 
  242  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1   519 
  246    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1   215 
  258  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1   503 
  262    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1   231 
  298  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1   463 
  302    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1   271 
  354  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1   407 
  358    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1   327 
  406  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1   355 
  426    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1   395 
  550  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1   211 
  634    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1   603 
  670  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1    91 
  682    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1   651 
  686  C MoSU021R_D09_BE446380Ta20P020B11P005G111R1_073.ab1    75 
  710    MoSU021F_D09_BE446380Ta20P020B11P005G111F1_073.ab1   679 
Contig length: old 783, new 783

Contig length: old 783, new 783
New start: 0